[Bug 2386481] New: Review Request: bidscoin - Converts and organises raw MRI data-sets according to BIDS

[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

 



https://bugzilla.redhat.com/show_bug.cgi?id=2386481

            Bug ID: 2386481
           Summary: Review Request: bidscoin - Converts and organises raw
                    MRI data-sets according to BIDS
           Product: Fedora
           Version: rawhide
          Hardware: All
                OS: Linux
            Status: NEW
         Component: Package Review
          Severity: medium
          Assignee: nobody@xxxxxxxxxxxxxxxxx
          Reporter: code@xxxxxxxxxxxxxxxxxx
        QA Contact: extras-qa@xxxxxxxxxxxxxxxxx
                CC: package-review@xxxxxxxxxxxxxxxxxxxxxxx
            Blocks: 1276941 (fedora-neuro,NeuroFedora)
  Target Milestone: ---
    Classification: Fedora



Spec URL: https://music.fedorapeople.org/bidscoin.spec
SRPM URL: https://music.fedorapeople.org/bidscoin-4.6.2-1.fc42.src.rpm

Description:

BIDScoin is a user-friendly Python application suite that converts (“coins”)
source-level (raw) neuroimaging data sets to standardized data sets that are
organized according to the Brain Imaging Data Structure (BIDS) specification.
Rather than depending on complex programmatic logic for source data-type
identification, BIDScoin uses a mapping approach to discover the different
source data types in your repository and convert them into BIDS data types.
Different runs of source data are uniquely identified by their file system
properties (e.g. file name or size) and by their attributes (e.g. ProtocolName
from the DICOM header). Mapping information can be pre-specified (e.g. per
site), allowing BIDScoin to make intelligent first suggestions on how to
classify and convert the data. While this command-line procedure exploits all
information available on disk, BIDScoin offers a Graphical User Interface (GUI)
for researchers to check and edit these mappings -- bringing in the missing
knowledge that often exists in their heads only. This interactive step can also
be skipped for employment in fully automated dataflow pipelines.

BIDScoin requires no programming knowledge in order to use it, but users can
use regular expressions and plug-ins to further enhance BIDScoin's power and
flexibility, and readily handle a wide variety of source data types.

Fedora Account System Username: music

This will be a neuro-sig package; it would close
https://pagure.io/neuro-sig/NeuroFedora/issue/500.



Referenced Bugs:

https://bugzilla.redhat.com/show_bug.cgi?id=1276941
[Bug 1276941] Fedora NeuroImaging and NeuroScience tracking bug
-- 
You are receiving this mail because:
You are on the CC list for the bug.
You are always notified about changes to this product and component
https://bugzilla.redhat.com/show_bug.cgi?id=2386481

Report this comment as SPAM: https://bugzilla.redhat.com/enter_bug.cgi?product=Bugzilla&format=report-spam&short_desc=Report%20of%20Bug%202386481%23c0

-- 
_______________________________________________
package-review mailing list -- package-review@xxxxxxxxxxxxxxxxxxxxxxx
To unsubscribe send an email to package-review-leave@xxxxxxxxxxxxxxxxxxxxxxx
Fedora Code of Conduct: https://docs.fedoraproject.org/en-US/project/code-of-conduct/
List Guidelines: https://fedoraproject.org/wiki/Mailing_list_guidelines
List Archives: https://lists.fedoraproject.org/archives/list/package-review@xxxxxxxxxxxxxxxxxxxxxxx
Do not reply to spam, report it: https://pagure.io/fedora-infrastructure/new_issue




[Index of Archives]     [Fedora Users]     [Fedora Desktop]     [Fedora SELinux]     [Yosemite Conditions]     [KDE Users]

  Powered by Linux